Ignacio Vazquez-Garcia

Ignacio Vazquez-Garcia

ignaciovazquez.bsky.social

Assistant Professor @ Massachusetts General Hospital | Harvard Medical School | Broad Institute https://vazquezgarcialab.mgh.harvard.edu/

👤 Joined on 09 February 2024

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  • 09 Şub 2024, 15:36
    🎉 Bluesky'e katıldı - İlk kullanıcı adı: @ignaciovazquez.bsky.social

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❤️ Beğendiği Gönderiler

1/ I'm excited to share that we're launching NECB 2026, the inaugural New England Computational Biology Symposium. Oct 1-2 at Microsoft Research New England, Cambridge. Two days of keynotes,talks, and posters to bring our community together across institutions.Space is limited. newenglandcompbio.org

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1/12 Excited to share that our new paper on IDH-mutant glioma (IDH-G) is now out in Nature Genetics! This work was a fantastic collaborativ effort of laboratories of @suvalab.bsky.social and @landau.bsky.social, co-lead by Ramya Raviram and Joshua S. Schiffman. www.nature.com/articles/s41...

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I'm excited to be starting at a Schmidt Science Fellow - I'll be applying my maths background in genomics to characterize the role of chromosomal instabilities in cancer evolution. Please reach out if you're interested in math modeling and quantitative tools for single-cell & longitudinal genomics!

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Despite the obvious superiority of fresh-frozen material for genomics, many samples are still stored in FFPE and remain challenging to characterize with Whole-genome sequencing. But here comes our solution:

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1/n Have you ever wondered whether an amplified oncogene in a patient’s tumor (HER2/EGFR/CCND1/…) is carried on extrachromosomal DNA (ecDNA) vs embedded within a chromosome? Bulk WGS + genome graph can hint, but in practice it’s often hard to resolve. Here is our new preprint.

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