martinhoelzer.bsky.social
Bioinformatics and translational research. Team lead at the Genome Competence Center at RKI, Berlin, Germany. https://hoelzer.github.io
👤 Joined on 16 January 2025
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@martinhoelzer.bsky.socialCareful implementation of Bayesian phylogenetics in Delphy allows huge speed gains and identical results to BEAST, but runs on your laptop browser www.nature.com/articles/s41... Amazing work from @pardissabeti.bsky.social , Patrick Varilly, @benfry.com and co.
Show PostSingle-page, interactive overlap assembler for teaching purposes: lh3.github.io/teach-demo/o... (vibe coded)
Show PostHallo Robert, hallo Berlin Metagenomics Network Symposium
Show PostCool preprint about strain-level metagenome association studies using k-mer containment. Mallawaarachchi et al. from @gerrythill.bsky.social's group. I tried tackling this in our original paper for sylph (sylph-docs.github.io), but this seems to be much more sophisticated. Excited to read!
Show Post1/ 🎂 Pathoplexus turns TWO! 🎉 Two years ago we launched with an idea: what if pathogen data sharing put open access, speed, ease of use, & credit for data generators at its center? Here's what our community has built since: 📰 Read the full update: pathoplexus.org/news/2026-08...
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