aelek.bsky.social
Postdoc @ Kaessmann and Sasse labs @zmbh.uni-heidelberg.de Previously PhD @ Sebé-Pedrós lab @crg.eu
👤 Joined on 14 November 2024
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@aelek.bsky.socialExcited to be awarded an ERC STG to continue our work on sex differences in medulloblastoma. Also happy that the ERC was also awarded to two other great people at DKFZ and my grad school roommate Kimberly Siletti at the UMCU!
Show PostVery happy to share the first pre-print from my postdoc work with @larsplus.bsky.social (which we also presented at the excellent @isehsociety.bsky.social Annual Meeting last weekend). Here we performed a CRISPRi Perturb-seq screen targeting >500 transcriptional regulators in ex vivo mouse HSPCs.
Show PostUpdate: scE2G is now online at Nature Genetics! Since the preprint, we added a new benchmark on a fully held-out CRISPR dataset. scE2G continues to show state-of-the-art performance, reinforcing that it generalizes well nature.com/articles/s41588-026-02695-8 1/
Show PostDid transposable elements shape brain evolution — and if so, which ones, and in which cell states and lineages? Led by @tyamadat.bsky.social, we explored this question in cerebellum development using sequence-based deep learning models! www.biorxiv.org/content/10.1...
Show PostOur manuscript on the co-option of TEs as cerebellar CREs is now officially published in @natcomms.nature.com! Huge thanks to @kaessmannlab.bsky.social @marisepp.bsky.social, and @ioansarr.bsky.social for the fantastic collaboration throughout this project! www.nature.com/articles/s41...
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