Gaëtan Benoit

Gaëtan Benoit

gaetanbenoit.bsky.social

Postdoc researcher in bioinformatics at Pasteur institute. Scalable methods and software for metagenomics. https://github.com/GaetanBenoitDev

👤 Joined on 06 January 2024

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  • 06 Oca 2024, 12:21
    🎉 Bluesky'e katıldı - İlk kullanıcı adı: @gaetanbenoit.bsky.social

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❤️ Beğendiği Gönderiler

I'll be there with Bonsai members, join us!

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L'article de Mediapart de ce soir est d'une très grande importance. On peut y lire comment le gouvernement manipule les services de renseignement pour imputer à tord à la France insoumise des actes dont elle n'est pas responsable. C'est une véritable affaire d'Etat.

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A New Algorithm for DNA Sequence Assembly by Idury and Waterman is still in restricted access behind a paywall. Published in nineteen effing ninety five. Seriously is this the Journal of Computational Biology or the Journal Against Computational Biology.

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16 October 2026 09:20

I’m excited to share our new preprint introducing HipHap, a tool for assigning long reads to haplotype-resolved diploid reference assemblies! With Max Marin, Matthew Meyerson, and @lh3lh3.bsky.social Preprint: www.biorxiv.org/content/10.6... 🧵 1/6

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Jim Shaw
12 October 2026 18:41

Skani (github.com/bluenote-157...) is now v0.4.0! Big performance update: **~2.5x faster** and ~30-40% less RAM for average nucleotide identity (ANI) comparison of genomes. The database format has changed (breaks forward compatibility; watch out!).

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