How can an unknown #bacteriophage be classified? A new guide presents 10 practical tips, covering genome quality, taxonomic tools, similarity searches, phylogenetics, protein structure, host range and ecology. 🦠🔬 #Virology  📄 https://doi.org/10.1371/journal.pcbi.1014403 👤 EVBC member: Colin Hill

Show Post

Riboseek is a fast RNA/DNA search. More sensitive than nhmmer at 250x speed. Structure-aware realignment produces MSAs approaching rMSA quality. Plus 1.7M precomputed RNA MSAs, and an API to search your own 📄 www.biorxiv.org/content/10.6... 💾 github.com/steineggerla... 🌐 search.foldseek.com/riboseek

Show Post

Our paper out in Science today: The Metis defense system senses molecular byproducts released when a phage degrades the bacterial genome, and then prevents replication of the phage in the infected cell Congratulations @ostermanilya.bsky.social and co-authors!

Show Post

That @naomialderman.bsky.social is so fucking brilliant. If you've found yourself falling out the reading habit, she has created a kind of Couch-to-5K of reading open.substack.com/pub/naomiald...

Show Post

How good is MiniBWA, the successor to BWA? To test it, I ran MiniBWA on sequencing from 76 different species, comparing mapping speed, rate and accuracy with BWA MEM. In short, it's really good. If you map short reads, it's well worth your time. andrewcarroll.github.io/2026/06/30/t...

Show Post