noeliaferruz.bsky.social
Generative models for protein design. Group leader at CRG
👤 Joined on 25 January 2024
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@noeliaferruz.bsky.socialNew paper showing that much of the apparent success of protein language models in predicting mutational effects is a mirage: These models mostly memorize sites. 1/ www.biorxiv.org/content/10.6...
Show PostHow does catalysis emerge from non-catalytic domains? In our new paper, we show that catalytic activity can arise without conserved active-site residues — through multimerization and electrostatic features instead. A striking case of catalysis evolving from binding.
Show PostSave the date: April 9 from 4pm to 6pm CET. Our department is hosting an online seminar with @noeliaferruz.bsky.social @sdomcke.bsky.social @const-ae.bsky.social who will talk about models for protein design, large-scale perturbation screens, and benchmarking of perturbation prediction models.
Show PostExcellent review on using generative models to design enzymes @noeliaferruz.bsky.social @lassemiddendorf.bsky.social arxiv.org/abs/2602.03779
Show PostDesign stable, folded proteins using only the 10 "ancient" amino acids. www.biorxiv.org/content/10.1...
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