gonzalobenegas.bsky.social
Research Scientist @ Open Athena | AI for Science https://gonzalobenegas.github.io/
👤 Joined on 26 September 2023
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@gonzalobenegas.bsky.socialWe hope these models, predictions, and datasets will be useful to the genomics community. Please check out the paper and resources above. For more background on GPN-Star, see my earlier post: bsky.app/profile/yun-... (n/n)
Show PostThis work was led by my talented students @czye.bsky.social and @gonzalobenegas.bsky.social sky.social, with contributions from other members of our lab (Carlos Albors, Canal Li, and Sebastian Prillo), @peterdfields.bsky.social lds.bsky.social at JAX, and @brianfclarke.bsky.social at DKFZ. (5/n)
Show PostThe pretrained models, training datasets, and benchmark datasets are also available on Hugging Face: huggingface.co/collections/... (4/n)
Show PostPrecomputed GPN-Star predictions for all possible single-nucleotide variants in the human genome and five model organisms (Mus musculus, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans, and Arabidopsis thaliana) are available on Hugging Face: doi.org/10.57967/hf/... (3/n)
Show PostThe published version has a new title, “Predicting genome-wide functional constraints with GPN-Star,” and, more importantly, includes a substantial number of new results not present in the original preprint, with 16 additional figures. (2/n)
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