lumasullo.bsky.social
Physicist | single molecules, biotech, nanotech, optics, fluorescence, glycans, immunology, cell signalling | Group Leader at Glycoscience Program IBYME
👤 Joined on 10 November 2024
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@lumasullo.bsky.socialVery excited to share our newest paper on finding positions of molecules in DNA-PAINT! G5M extracts more information from the data than previous tools, allowing for accurate molecular mapping.
Show PostWe hope G5M pushes molecular mapping forward. Excited to see the discoveries it enables! Thanks to @rafalkowalew.bsky.social, @susannereinhardt.bsky.social, @ipachmayr.bsky.social, Shuhan Xu, @lumasullo.bsky.social for developing G5M and the @jungmannlab.bsky.social for testing and improving it. 7/7
Show PostG5M is implemented in Picasso since version 0.9.5: github.com/jungmannlab/..., although we always recommend using the most recent version! A short documentation: picassosr.readthedocs.io/en/latest/re.... We advise reading the whole paper for best results! 6/7
Show PostBonus: we found a new formula for axial loc. precision for astigmatic imaging for any z position. It only depends on the 3D calibration and the properties of localizations. Interestingly, the results are not necessarily symmetric around z = 0. 5/7
Show PostWe validated G5M on DNA origami, Nuclear Pore Complexes (NPCs) and Obinutuzumab-treated CD20 RESI data. In NPCs, G5M found twice as many Nup96 dimers as GA, demonstrating increased accuracy in molecular mapping. 4/7
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