Jean-Yves Tinevez

jytinevez.bsky.social

06 October 2026 12:37

We have a position open in our core facility in the @pasteur.fr . Please share it and / or apply! forum.image.sc/t/research-e...

Loïc A. Royer 💻🔬🧪

loicaroyer.bsky.social

06 October 2026 09:38

🏁 That's a wrap! The @biohub.org Cell Tracking machine learning challenge on @kaggle.com is over: 4,478 participants, 3,947 teams, 120 countries, 95,438 submissions, tracking every cell of zebrafish embryos. 🧪🔬🧵 kaggle.com/competition... #microscopy

Daniel Krentzel

danielkrentzel.bsky.social

02 October 2026 18:34

Thank you!! 🙏

James Manton

jamesdmanton.bsky.social

30 September 2026 16:02

A key design goal was to exceed the bandwidth of a saturated sCMOS camera (0.7813 GiB/s) without needing a GPU. Current benchmarking suggests my office PC should be able to handle 3. Another goal was high compression ratio: JPEG-XL lossless (effort 9) beats us by 3.7%, but we're ~1000× faster.

James Manton

jamesdmanton.bsky.social

30 September 2026 16:02

Blosc2 bitshuffle + Zstd-5 beats us on speed (approximately double encode and decode), but produces files about a third larger. Nevertheless, if speed is the ultimate concern, this is probably the way to go.