firefoxx66.bsky.social
Die Virenjägerin! 🏹🧬! Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel. Founder of CoVariants.org, co-founder of @pathoplexus.org I like 🐈 & 🛫 @firefoxx66@mstdn.science
👤 Joined on 09 May 2023
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@firefoxx66.bsky.socialI think we just need to get more comfortable with shipping known defects.
Show PostGreat to see PHA4GE members at GMI16 in Tunis. 🧬🌍 @torstenseemann.bsky.social, @happykhan.mstdn.science.ap.brid.gy, @firefoxx66.bsky.social, @ruthtimme.bsky.social and Heather Carleton-Romer shared work on genomic surveillance, metadata and data sharing. #PHA4GE #GMI16
Show PostWe are going to miss you very much, Helen. https://www.statnews.com/2026/10/13/helen-branswell-stat-reporter-obituary/
Show Post3/ 📤 Ready to try it? Upload raw reads files alongside your next submission (individual or bulk), add them to your existing consensus sequences, and check out our docs for the details on required metadata. 🔗 pathoplexus.org/news/2026-09... #OpenData #OpenScience #PathogenGenomics
Show Post2/ ⚙️ How it works: raw reads follow all the same policies as consensus sequences - your chosen Data Use Terms apply to both, and raw reads are openly downloadable as soon as processing completes. Pathoplexus handles INSDC submission for you, just like today.
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