Emzo de los Santos
scyphs.bsky.social
Data Scientist at UCB, Random thoughts about Proteins, Bacteria, Genomes and AI (-Skynet), Philosophy and Religion. 100% made in the 🇵🇭 Thoughts are my own.
👤 Joined on 18 October 2023
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- 18 Eki 2023, 14:40
🎉 Bluesky'e katıldı - İlk kullanıcı adı:
@scyphs.bsky.social - 13 Kas 2023, 00:35
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ESM-2 with FlashAttention github.com/pengzhangzhi...
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New blogpost: The ABCs of Alphafold 3, Boltz and Chai-1 blog.booleanbiotech.com/alphafold3-b...
Show PostMajor differences are also observed when using these models as training data. Hsu et al found that inverse folding methods trained on 10^4 to 10^5 experimental structures outperformed those trained on 10^7 alphafold models (table shows perplexities, lower is better). doi.org/10.1101/2022...
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Jared Mcain is apparently only 1/10th Filipino but obv we’re claiming the remaining 9/10ths.
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🚀 Advancing T-cell receptor (TCR) research! We developed tcrBLOSUM, a specialized substitution matrix for sensitive alignment of distant epitope-specific TCRs. Find out how our findings expand TCR analysis: doi.org/10.1093/bib/... #Bioinformatics #Immunology #AIRR with @pmeysman.bsky.social
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