uermel.bsky.social
Scientist at bi[o]hub, Redwood City, CA I like to make open source cryoET things.
👤 Joined on 16 November 2024
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@uermel.bsky.socialShawn Zheng leads Biohub’s work to streamline cryo-electron tomography, which images cells in 3D at near-atomic resolution. His team’s AreTomoLive automates cryoET reconstruction and denoising in real time and cuts processing from months to days. Learn more: sbgrid.org/software/tal...
Show Post1/5 Cryo-EM gives high-resolution RNA structures, but only when high Mg²⁺ freezes out their motion. At physiological conditions, RNAs are dynamic and 3D reconstruction fails. Can we still learn their folding equilibria? New preprint: yes, straight from the raw particle images👇
Show PostThat looks incredible! It’s great to see SPA working so well. That LPP contrast brings back memories of our VPP data collection in Martinsried a long time ago - so many sleepless nights spent acquiring data, only to fail later when trying to improve the resolution. Congratulations, Utz!
Show PostWow. Fantastic data and results 😮. Also fantastic: playing the Futurama intro tune with the first 10 seconds of this movie.
Show PostWhat if any dataset, any size, any number of dimensions, opened in a browser tab from a link? 🔬🧪💻 Luxar is out today: write it in Python, share it as a link, explore it in any browser. Open source. 🧵 @biohub.org Preprint: doi.org/10.5281/zen... Code: github.com/royerlab/luxar
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