ncorley.bsky.social
PhD Candidate @ the University of Washington's Institute for Protein Design | Baker Lab | Machine Learning for Protein Design | Enzymes
👤 Joined on 20 November 2024
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@ncorley.bsky.socialThis is insane work! I really hope this type of research is pushed forward; it could definitely help humanity a lot within the medical field. Good job to everyone!
Show PostAtomWorks has two main components: atomworks.io takes a file (cif, sdf, ...) and does parsing, cleaning and more. You can also look at your structures in a notebook or via PyMol thanks to pymol-remote, so you can directly inspect if your code does what you want! 3/6
Show Post`atomworks.ml` on the other hand offers advanced dataset featurization and sampling for deep learning workflows, all operating on the canonical AtomArray object from @biotite_python so that all transforms are traceable and generalizable between models. 4/6
Show PostFor more details read the thread by the man himself: bsky.app/profile/ncor...
Show PostRosettaFold 3 is here! 🧬🚀 AtomWorks (the foundational data pipeline powering it) is perhaps the really most exciting part of this release! Congratulations @simonmathis.bsky.social and team!!! ❤️ bioRxiv preprint: www.biorxiv.org/content/10.1...
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