UC Santa Cruz Genomics Institute
ucscgenomics.bsky.social
Focusing the power of genomics to create a healthier world. Leader in pangenomics, conservation genomics, cancer genomics, pathogen genomics, and nanopore sequencing. Home of the UCSC Genome Browser, @ucscxena, UShER, Dockstore, and other high-power tools.
👤 Joined on 15 September 2023
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- 15 Eyl 2023, 14:06
🎉 Bluesky'e katıldı - İlk kullanıcı adı:
@ucscgenomics.bsky.social - 10 Kas 2023, 05:01
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ASHG 2026 is just one week away! HPRC members will be presenting their research throughout the meeting. Stay tuned for more details to help you plan your time at ASHG and connect with HPRC.
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Fst is a key genetic differentiation metric, but it emphasizes common variants over rare. In IEEE ICASSP out now lab member Margarita Geleta introduces Fq, which can be tuned across the allele freq spectrum. Fst & Shannon differentiation fall out of it as special cases. arxiv.org/abs/2511.03063
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New public hub: Sci-ModoM RNA modification sites. 7.9M m6A, pseudouridine, m5C and 2'-O-methylation sites on hg38 and mm39, each with its coverage and percent modified. Explore hub: genome.ucsc.edu/s/Lo... More public hubs: genome.ucsc.edu/cgi-...
Show PostShredtools is making it easier to explore regions across a pangenome by quickly finding matching genomic regions across hundreds of genomes. The tool can identify a gene region across 476 human genomes in approximately half a second. Read more: www.biorxiv.org/content/10.6...
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Heading home with my lab after a wonderful time at @mblscience.bsky.social for #cnidofest2026 (picture I took when I realized my grad student and I were wearing matching 🪼socks)
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