Paul Gardner

Paul Gardner

ppgardne.bsky.social

Bioinformatics, RNA, benchmarking & educating to fund kayaking and fishing. Ōtepoti/Dunedin, Aotearoa/New Zealand. From Whāngārā.

👤 Joined on 06 October 2023

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  • 06 Eki 2023, 04:41
    🎉 Bluesky'e katıldı - İlk kullanıcı adı: @ppgardne.bsky.social
  • 10 Kas 2023, 00:13
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For Carrie Frances: 🎂 ❤️

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Joe Hanly
22 October 2026 04:11

I represent the synteny more or less as a hypergraph, which means we're storing all chromosme interactions at once, rather than in many pairwise graph matrices. Rules: chroms may move along a row or be reversed. Internal parts of a chrom must not change order, and no connections may be removed. 2/

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Joe Hanly
22 October 2026 04:11

An attempt to explain what this does, using a simple case. How much 'tangle' in a synteny plot comes how we chose to order chromosomes, and how much is unavoidable because it represents accurate crossings in the data? 1/

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And I want 10000 wasps to swarm david seymour. We sometimes just dont get what we want

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22 October 2026 04:10

That’s funny cos I want fewer charter schools by 2028, and better school lunches for kids by 2027

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