grovearmada.bsky.social
Investigating viruses, using pipettes, #AI and coffee. Learn more at the lab website: https://grovelab.github.io/ Check out our database of viral protein structure predictions: https://viro3d.cvr.gla.ac.uk/ Based at: @cvrinfo.bsky.social
👤 Joined on 10 December 2023
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@grovearmada.bsky.socialNew preprint led by Jamie Herzig w innovative phylo-graph machine learning! 🕸️ Dissects that q "are our genotype-to-phenotype host predictions really adaptive mechns or just phylogenetic signal?" For paramyxoviruses, explicitly using shared ancestry structure tells us a lot! @cvrinfo.bsky.social
Show PostA rare photograph of Reviewer Two
Show PostAminopeptidase N is a receptor for hedgehog merbecoviruses | @natmicrobiol.nature.com www.nature.com/articles/s41...
Show PostColabFold 1.6.3 is out! 2.5x faster, pip-installable, ipSAE+pDockQ2 scores. Thanks Choonghwan Lee, Marielle Russo, Gyuri Kim 🐍pip install colabfold[alphafold] CF2 Sneak Peak with AF3/Boltz/Protenix/ESMFold2… 🐍pip install "colabfold[alphafold3]@git+https://github.com/sokrypton/ColabFold@af3-preview"
Show PostFinally a more intuitaive way to learn pLDDT/pAE? 😎 sokrypton.github.io/protein_figh... (Character idea from @hannes-stark.bsky.social & Alex Waldherr)
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