Andy Foote
@andrewfoote.bsky.social did:plc:oshpmdo2mh4gckbxmclqu66d
Evolutionary biologist using ancient and modern DNA to study evolution through time and space.
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Andy Foote (@andrewfoote.bsky.social), 21 Ekim 2023 tarihinde katılan bir Bluesky kullanıcısı. 1.734 takipçisi var, 861 hesabı takip ediyor ve 99 post paylaştı.
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Bluesky ağındaki herkese açık beğeniler.
Overall I'm very surprised that these issues arent more widely acknowledged in the conservation genomics literature, and seem to be making it past reviewers quite frequently (and in this particular case, resulted in a Science paper with far-reaching claims about genetic diversity loss)
Postu gösterWrite this up, throw in some modeling, get it in the literature.
Postu gösterI see (and often review) so many papers that make these comparisons between modern and historical genomes and estimate large shifts in diversity on short timescales (~10-20 generations) that simply are not possible based on basic pop gen and are screaming of batch effects due to aDNA degradation.
Postu gösterNew #rstats package: hybridclock dates hybrid populations beyond F2, with or without a genetic map, with calibrated intervals. Validated on 23 datasets, from F1s to 56 generations. Tutorial on five real datasets: paulmaier.github.io/hybridclock #popgen #hybridization
Postu gösterOut in MEC! Salis et al. studied DNA preservation in museum specimens by comparing frozen tissue, dried skins, skeletons, and fluid preserved across a variety of taxa. How does each work for genetic research? @wileyecology.bsky.social 🔗: buff.ly/zR7vva0 📷️: Christopher J Raxworthy
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