Lakhansing Pardeshi
@lakhanp01.bsky.social did:plc:d6htqvy2d5v2uzbysaax3cug
PhD Candidate | Pangenomics, Bioinformatics 💻, Pathogen evolution 🦠, MGEs | @w-u-r.bsky.social
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Summary
Lakhansing Pardeshi (@lakhanp01.bsky.social) is a Bluesky user who joined on 23 March 2025. They have 36 followers, follow 185 accounts and have published 3 posts.
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1/3 I'm delighted to share that Amira, a tool I worked on during my PhD, has been published in Genome Biology! 🎉 Genome assembly often struggles to reconstruct AMR markers, meaning we can miss them entirely. Amira detects them more sensitively than existing approaches.
Show postThrilled to share this pre-print from an exciting collaboration with @bnashby.bsky.social, @asherleeks.bsky.social and @bramvandijk.bsky.social! Viral cheats that emerge through social evolution, under vertical transmission as proviruses, become defense systems to their hosts.
Show post💥 You asked. RAW Lab delivered. DYNAMITE-ORFs v1.1.0 🧬 ✅ Prodigal gap controls ✅ Gene-calling fixes ⚡ E. coli auto mode: 20.6 → 9.2s in our benchmark Messy genomes. Meet DYNAMITE. crates.io/crates/dynam... #Bioinformatics #Rust
Show postProbably the most useful exploratory tool I’ve seen all in a web browser. It’s so quick and easy to use. Super cool stuff. And also an excellent teaching resource to show alignments and dotplots.
Show postVersion 1.3.2 of PearTree released: github.com/artic-networ... Fixes many of the remaining niggling bugs. WebApp updated at peartree.live
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