robp.bsky.social
Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
👤 Joined on 17 Juni 2023
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@robp.bsky.socialAh shit if this traffic jam isn’t mutable I’m never getting out of here
Show Post1) I wrote the two posts because editors let authors rebut AI reviews. 2) For standard human peer review, you can use the excuse occasionally but not on 30+ comments. I don't want to put the blame on editors. They have a hard time as well.
Show PostLet me know how it goes for you. Not many people have used it, especially the latest release with homopolymer compression and some other tricks.
Show PostGlad to announce a big new release of Helicase, my Rust library for FASTA/Q parsing and bitpacking! With this new version, it's now consistently the fastest Rust parser (1.1-4x faster than needletail) and supports parallel processing!
Show Postbowtie2 just got 37X faster in the browser! Using WebAssembly SIMD, aligning 1M reads went from 19min to 30s, close to native speeds. It's now practical to run sequence alignment in the browser. Available on biowasm today: biowasm.com/cdn/v3/bowti... cc @benlangmead.bsky.social
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